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Creators/Authors contains: "Pequito, Sérgio"

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  1. Abstract Controlling large-scale dynamical networks is crucial to understand and, ultimately, craft the evolution of complex behavior. While broadly speaking we understand how to control Markov dynamical networks, where the current state is only a function of its previous state, we lack a general understanding of how to control dynamical networks whose current state depends on states in the distant past (i.e. long-term memory). Therefore, we require a different way to analyze and control the more prevalent long-term memory dynamical networks. Herein, we propose a new approach to control dynamical networks exhibiting long-term power-law memory dependencies. Our newly proposed method enables us to find the minimum number of driven nodes (i.e. the state vertices in the network that are connected to one and only one input) and their placement to control a long-term power-law memory dynamical network given a specific time-horizon, which we define as the ‘time-to-control’. Remarkably, we provide evidence that long-term power-law memory dynamical networks require considerably fewer driven nodes to steer the network’s state to a desired goal for any given time-to-control as compared with Markov dynamical networks. Finally, our method can be used as a tool to determine the existence of long-term memory dynamics in networks. 
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  2. Stamatakis, Emmanuel Andreas (Ed.)
    A fundamental challenge in neuroscience is to uncover the principles governing how the brain interacts with the external environment. However, assumptions about external stimuli fundamentally constrain current computational models. We show in silico that unknown external stimulation can produce error in the estimated linear time-invariant dynamical system. To address these limitations, we propose an approach to retrieve the external (unknown) input parameters and demonstrate that the estimated system parameters during external input quiescence uncover spatiotemporal profiles of external inputs over external stimulation periods more accurately. Finally, we unveil the expected (and unexpected) sensory and task-related extra-cortical input profiles using functional magnetic resonance imaging data acquired from 96 subjects (Human Connectome Project) during the resting-state and task scans. This dynamical systems model of the brain offers information on the structure and dimensionality of the BOLD signal’s external drivers and shines a light on the likely external sources contributing to the BOLD signal’s non-stationarity. Our findings show the role of exogenous inputs in the BOLD dynamics and highlight the importance of accounting for external inputs to unravel the brain’s time-varying functional dynamics. 
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  3. Giove, Federico (Ed.)
    Resting-state blood-oxygen-level-dependent (BOLD) signal acquired through functional magnetic resonance imaging is a proxy of neural activity and a key mechanism for assessing neurological conditions. Therefore, practical tools to filter out artefacts that can compromise the assessment are required. On the one hand, a variety of tailored methods to preprocess the data to deal with identified sources of noise (e.g., head motion, heart beating, and breathing, just to mention a few) are in place. But, on the other hand, there might be unknown sources of unstructured noise present in the data. Therefore, to mitigate the effects of such unstructured noises, we propose a model-based filter that explores the statistical properties of the underlying signal (i.e., long-term memory). Specifically, we consider autoregressive fractional integrative process filters. Remarkably, we provide evidence that such processes can model the signals at different regions of interest to attain stationarity. Furthermore, we use a principled analysis where a ground-truth signal with statistical properties similar to the BOLD signal under the injection of noise is retrieved using the proposed filters. Next, we considered preprocessed (i.e., the identified sources of noise removed) resting-state BOLD data of 98 subjects from the Human Connectome Project. Our results demonstrate that the proposed filters decrease the power in the higher frequencies. However, unlike the low-pass filters, the proposed filters do not remove all high-frequency information, instead they preserve process-related higher frequency information. Additionally, we considered four different metrics (power spectrum, functional connectivity using the Pearson’s correlation, coherence, and eigenbrains) to infer the impact of such filter. We provided evidence that whereas the first three keep most of the features of interest from a neuroscience perspective unchanged, the latter exhibits some variations that could be due to the sporadic activity filtered out. 
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  4. Assessing the stability of biological system models has aided in uncovering a plethora of new insights in genetics, neuroscience, and medicine. In this paper, we focus on analyzing the stability of neurological signals, including electroencephalogram (EEG) signals. Interestingly, spatiotemporal discrete-time linear fractional-order systems (DTLFOS) have been shown to accurately and efficiently represent a variety of neurological and physiological signals. Here, we leverage the conditions for stability of DTLFOS to assess a real-world EEG data set. By analyzing the stability of EEG signals during movement and rest tasks, we provide evidence of the usefulness of the quantification of stability as a bio-marker for cognitive motor control. 
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  5. null (Ed.)
    Abstract Recent advances in network science, control theory, and fractional calculus provide us with mathematical tools necessary for modeling and controlling complex dynamical networks (CDNs) that exhibit long-term memory. Selecting the minimum number of driven nodes such that the network is steered to a prescribed state is a key problem to guarantee that complex networks have a desirable behavior. Therefore, in this paper, we study the effects of long-term memory and of the topological properties on the minimum number of driven nodes and the required control energy. To this end, we introduce Gramian-based methods for optimal driven node selection for complex dynamical networks with long-term memory and by leveraging the structure of the cost function, we design a greedy algorithm to obtain near-optimal approximations in a computationally efficiently manner. We investigate how the memory and topological properties influence the control effort by considering Erdős–Rényi, Barabási–Albert and Watts–Strogatz networks whose temporal dynamics follow a fractional order state equation. We provide evidence that scale-free and small-world networks are easier to control in terms of both the number of required actuators and the average control energy. Additionally, we show how our method could be applied to control complex networks originating from the human brain and we discover that certain brain cortex regions have a stronger impact on the controllability of network than others. 
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  6. null (Ed.)
    The ability to steer the state of a dynamical network towards a desired state within a time horizon is intrinsically dependent on the number of driven nodes considered, as well as the network’s topology. The trade-off between time-to-control and the minimum number of driven nodes is captured by the notion of the actuation spectrum (AS). We study the actuation spectra of a variety of artificial and real-world networked systems, modeled by fractional-order dynamics that are capable of capturing non-Markovian time properties with power-law dependencies. We find evidence that, in both types of networks, the actuation spectra are similar when the time-to-control is less or equal to about 1/5 of the size of the network. Nonetheless, for a time-to-control larger than the network size, the minimum number of driven nodes required to attain controllability in networks with fractional-order dynamics may still decrease in comparison with other networks with Markovian properties. These differences suggest that the minimum number of driven nodes can be used to determine the true dynamical nature of the network. Furthermore, such differences also suggest that new generative models are required to reproduce the actuation spectra of real fractional-order dynamical networks. 
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